Set of SNPs and TCC accessions from TRADITOM_GBS with maximum missing markers for each individual 25%, maximum missing individuals for each marker25%, minor Allele Frequency (MAF) 5% and Homozygous fraction below 5%. that have passed all quality filters (minimum read depth 3, less than 30% missing data per SNP, maximum heterozygosity per SNP 10% and less than 30% missing data per accession)
Filtering was done by assuring maximum missing markers for each individual 25%, maximum missing individuals for each marker25%, minor Allele Frequency (MAF) 5% and Homozygous fraction below 5%.