Variant Set Metadata Details

Variant Set Metadata Basic Information

TRADITOM_111K SNPsx1316acc
Complete set of SNPs and accessions from TRADITOM_GBS that have passed all filters (minimum read depth 3, less than 30% missing data per SNP, maximum heterozygosity per SNP 10% and less than 30% missing data per accession)
The SNP called matrix was filtered to contain only accessions from the traditional tomato, with a minimum read depth 3, less than 30% missing data per SNP, maximum heterozygosity per SNP 10%, and less than 30% missing data per accession
110910

Data File & Genotyping Platform

Variant_set_TRADITOM.vcf
84c9942dde8dcb7f91c2db557d4348cbVariant_set_TRADITOM.zip
TRADITOM_GBS